Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 PRYP6-201ENST00000514804 343 ntBASIC13.94□□□□□ -0.18
TREM2Q9NZC2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 PCGF3-213ENST00000620529 1899 ntBASIC13.94□□□□□ -0.18
TREM2Q9NZC2 AC008267.7-201ENST00000624570 1194 ntBASIC13.94□□□□□ -0.18
TREM2Q9NZC2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 AC092364.2-201ENST00000596710 2692 ntBASIC13.94□□□□□ -0.18
TREM2Q9NZC2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TREM2Q9NZC2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AP000842.3-202ENST00000569238 1080 ntBASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AC092364.2-202ENST00000597012 1073 ntBASIC13.93□□□□□ -0.18
TREM2Q9NZC2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREM2Q9NZC2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREM2Q9NZC2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms