Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AC044849.1-201ENST00000519737 1188 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AC134698.3-201ENST00000523880 214 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 FGFR3P5-201ENST00000564496 886 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 MIR3907-201ENST00000579424 151 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AL450472.2-201ENST00000603663 1156 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 ECM1P1-201ENST00000604092 1279 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AC007663.3-201ENST00000609632 465 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 AL592424.1-201ENST00000563624 1536 ntBASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf49Q9H6J7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 NKAIN1P1-201ENST00000435754 582 ntBASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 Z97180.1-201ENST00000445173 988 ntBASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 POU5F1P6-201ENST00000466990 990 ntBASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 AC008267.1-201ENST00000474858 1069 ntBASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf49Q9H6J7 AC009053.2-201ENST00000563701 2365 ntBASIC17.33■□□□□ 0.37
C11orf49Q9H6J7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
C11orf49Q9H6J7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf49Q9H6J7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
C11orf49Q9H6J7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.33■□□□□ 0.37
C11orf49Q9H6J7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf49Q9H6J7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 AL023775.1-201ENST00000454907 1746 ntBASIC17.33■□□□□ 0.36
C11orf49Q9H6J7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.32■□□□□ 0.36
C11orf49Q9H6J7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.32■□□□□ 0.36
C11orf49Q9H6J7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms