Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 KRT18P58-201ENST00000527480 1120 ntBASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 AC002347.1-201ENST00000569543 541 ntBASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 AKAP8P1-201ENST00000434743 1349 ntBASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 MYO15B-237ENST00000642007 4893 ntBASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 AL022342.1-201ENST00000400363 863 ntBASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 HAUS4P1-201ENST00000406739 1145 ntBASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 FAM58CP-201ENST00000435741 640 ntBASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 FAM86C2P-203ENST00000528684 1004 ntBASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 AC091812.2-201ENST00000619081 385 ntBASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCDC68Q9H2F9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AL589702.1-201ENST00000641229 1509 ntBASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AL671277.1-201ENST00000429656 993 ntBASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AC245100.5-201ENST00000452108 331 ntBASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AC099522.2-201ENST00000607001 744 ntBASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms