Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 RNA5SP419-201ENST00000515908 135 ntBASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 Z83851.2-201ENST00000609564 659 ntBASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 AC073439.1-201ENST00000624121 1774 ntBASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 WASH6P-202ENST00000359512 1437 ntBASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR2J3Q9H1A7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 TMBIM7P-203ENST00000641617 1718 ntBASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 AC099063.4-201ENST00000641099 1602 ntBASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 PRYP6-201ENST00000514804 343 ntBASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms