Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 SPDYE18-201ENST00000510091 1050 ntBASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 AC026979.3-201ENST00000607315 403 ntBASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 MIR6752-201ENST00000618442 71 ntBASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 IGHV3-72-202ENST00000621503 303 ntBASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPAP1Q9BWH6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 AC087499.6-201ENST00000411576 835 ntBASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 ARSEP1-201ENST00000420443 635 ntBASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 AC055876.2-201ENST00000531834 546 ntBASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.37■□□□□ 0.69
RPAP1Q9BWH6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 AP006294.1-201ENST00000415407 339 ntBASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 ATP5G2P4-201ENST00000442175 420 ntBASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 GPR53P-205ENST00000457298 1084 ntBASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 DOC2GP-202ENST00000514950 1163 ntBASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 AC044860.1-202ENST00000559481 777 ntBASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 AL008721.1-201ENST00000609964 604 ntBASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPAP1Q9BWH6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 SLC7A15P-201ENST00000424028 1363 ntBASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms