Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 AC006538.1-201ENST00000567905 1585 ntBASIC18.24■□□□□ 0.51
CCDC94Q9BW85 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC94Q9BW85 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 PMS2P4-201ENST00000412466 1052 ntBASIC18.23■□□□□ 0.51
CCDC94Q9BW85 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 AP000344.2-201ENST00000512987 629 ntBASIC18.23■□□□□ 0.51
CCDC94Q9BW85 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 MIR3909-201ENST00000579518 119 ntBASIC18.23■□□□□ 0.51
CCDC94Q9BW85 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 CICP24-201ENST00000605464 2705 ntBASIC18.23■□□□□ 0.51
CCDC94Q9BW85 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 AC007292.2-201ENST00000593524 1812 ntBASIC18.23■□□□□ 0.51
CCDC94Q9BW85 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC94Q9BW85 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 ADH5P3-201ENST00000433842 1137 ntBASIC18.22■□□□□ 0.51
CCDC94Q9BW85 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 AC026120.1-201ENST00000611536 926 ntBASIC18.22■□□□□ 0.51
CCDC94Q9BW85 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC94Q9BW85 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms