Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.42■□□□□ 0.06
THUMPD3Q9BV44 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 AC008677.1-201ENST00000519230 1561 ntBASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 LINC02228-204ENST00000642115 2962 ntBASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 AC079776.4-201ENST00000511039 504 ntBASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 TNRC18P2-201ENST00000417666 2714 ntBASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.41■□□□□ 0.06
THUMPD3Q9BV44 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 AC020658.6-201ENST00000623564 1870 ntBASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 CICP13-201ENST00000422015 2789 ntBASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 RNU1-129P-201ENST00000384064 167 ntBASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 HAUS4P1-201ENST00000406739 1145 ntBASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 AC108751.1-201ENST00000490852 363 ntBASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 UNC93B6-202ENST00000528242 690 ntBASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 U1.21-201ENST00000580816 167 ntBASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THUMPD3Q9BV44 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 RNA5SP415-201ENST00000517246 115 ntBASIC15.39■□□□□ 0.05
THUMPD3Q9BV44 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms