Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
NICN1Q9BSH3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 TMBIM7P-203ENST00000641617 1718 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AC138035.3-201ENST00000622706 2791 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 HNRNPDP1-201ENST00000439535 754 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AC093724.1-201ENST00000448659 1027 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AC105339.3-201ENST00000560043 636 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 IFNL4P1-201ENST00000607083 540 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AC012313.10-201ENST00000623509 926 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 AC005593.1-201ENST00000624894 515 ntBASIC13.82□□□□□ -0.2
NICN1Q9BSH3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NICN1Q9BSH3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 CXCL1P1-201ENST00000502804 216 ntBASIC13.81□□□□□ -0.2
NICN1Q9BSH3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 TP73-AS1-207ENST00000624167 988 ntBASIC13.81□□□□□ -0.2
NICN1Q9BSH3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NICN1Q9BSH3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms