Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 FAM86MP-201ENST00000340703 885 ntBASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 AL355994.2-201ENST00000447882 704 ntBASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP2Q96SN8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 GAPDHP40-201ENST00000505218 1006 ntBASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDK5RAP2Q96SN8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 ACTG1P3-201ENST00000431775 1114 ntBASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 AL590640.2-201ENST00000457038 527 ntBASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDK5RAP2Q96SN8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AC022210.1-201ENST00000449856 793 ntBASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 SLC25A47P1-201ENST00000531577 414 ntBASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP2Q96SN8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms