Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ITCHQ96J02 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ITCHQ96J02 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 MIR600HG-201ENST00000449175 5984 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ITCHQ96J02 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ITCHQ96J02 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.33■□□□□ 0.04
ITCHQ96J02 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.33■□□□□ 0.04
ITCHQ96J02 RHOQP3-201ENST00000437982 621 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 AC009947.1-201ENST00000444350 727 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.33■□□□□ 0.04
ITCHQ96J02 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.33■□□□□ 0.04
ITCHQ96J02 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.33■□□□□ 0.04
ITCHQ96J02 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.33■□□□□ 0.04
ITCHQ96J02 AC002347.1-201ENST00000569543 541 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.33■□□□□ 0.04
ITCHQ96J02 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.33■□□□□ 0.04
ITCHQ96J02 AC023141.13-201ENST00000604991 943 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 AC010507.1-201ENST00000633895 436 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 CICP13-201ENST00000422015 2789 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 AC087481.3-201ENST00000602886 1894 ntBASIC15.33■□□□□ 0.04
ITCHQ96J02 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.33■□□□□ 0.04
ITCHQ96J02 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITCHQ96J02 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ITCHQ96J02 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.33■□□□□ 0.04
ITCHQ96J02 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ITCHQ96J02 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 AL031284.1-201ENST00000419297 478 ntBASIC15.32■□□□□ 0.04
ITCHQ96J02 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.32■□□□□ 0.04
ITCHQ96J02 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.32■□□□□ 0.04
ITCHQ96J02 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.32■□□□□ 0.04
ITCHQ96J02 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.32■□□□□ 0.04
ITCHQ96J02 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.32■□□□□ 0.04
ITCHQ96J02 MIR7706-201ENST00000613747 67 ntBASIC15.32■□□□□ 0.04
ITCHQ96J02 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 PMS2P7-201ENST00000506558 1336 ntBASIC15.32■□□□□ 0.04
ITCHQ96J02 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.32■□□□□ 0.04
ITCHQ96J02 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
ITCHQ96J02 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITCHQ96J02 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
ITCHQ96J02 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ITCHQ96J02 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.31■□□□□ 0.04
ITCHQ96J02 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms