Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 MIR6727-201ENST00000620702 65 ntBASIC15.8■□□□□ 0.12
CLDN23Q96B33 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 HLA-A-202ENST00000376806 1854 ntBASIC15.8■□□□□ 0.12
CLDN23Q96B33 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 KRT8P19-201ENST00000551916 1455 ntBASIC15.79■□□□□ 0.12
CLDN23Q96B33 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 KRT8P35-201ENST00000483942 1338 ntBASIC15.79■□□□□ 0.12
CLDN23Q96B33 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.79■□□□□ 0.12
CLDN23Q96B33 AL133267.1-201ENST00000398220 340 ntBASIC15.79■□□□□ 0.12
CLDN23Q96B33 FXNP2-201ENST00000411625 547 ntBASIC15.79■□□□□ 0.12
CLDN23Q96B33 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 AC138627.1-207ENST00000641560 1006 ntBASIC15.79■□□□□ 0.12
CLDN23Q96B33 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLDN23Q96B33 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN23Q96B33 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 POM121L10P-201ENST00000436994 1285 ntBASIC15.78■□□□□ 0.12
CLDN23Q96B33 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 CHMP4BP1-201ENST00000556017 588 ntBASIC15.78■□□□□ 0.12
CLDN23Q96B33 MIR4722-201ENST00000578292 60 ntBASIC15.78■□□□□ 0.12
CLDN23Q96B33 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 AC018735.1-201ENST00000437208 1502 ntBASIC15.78■□□□□ 0.12
CLDN23Q96B33 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN23Q96B33 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN23Q96B33 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN23Q96B33 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN23Q96B33 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN23Q96B33 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN23Q96B33 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms