Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 AP002469.2-201ENST00000531724 424 ntBASIC15.47■□□□□ 0.07
VPS33AQ96AX1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 AL031432.2-201ENST00000566714 459 ntBASIC15.47■□□□□ 0.07
VPS33AQ96AX1 AL928711.1-201ENST00000570165 459 ntBASIC15.47■□□□□ 0.07
VPS33AQ96AX1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 AC117500.6-201ENST00000624871 588 ntBASIC15.47■□□□□ 0.07
VPS33AQ96AX1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 PCDHA3-202ENST00000532566 4594 ntBASIC15.47■□□□□ 0.07
VPS33AQ96AX1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS33AQ96AX1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 AC087481.3-201ENST00000602886 1894 ntBASIC15.46■□□□□ 0.07
VPS33AQ96AX1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 MIR4751-201ENST00000578027 74 ntBASIC15.46■□□□□ 0.07
VPS33AQ96AX1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 AC148477.8-201ENST00000624298 468 ntBASIC15.46■□□□□ 0.07
VPS33AQ96AX1 AL645728.2-201ENST00000641974 660 ntBASIC15.46■□□□□ 0.07
VPS33AQ96AX1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VPS33AQ96AX1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.46■□□□□ 0.06
VPS33AQ96AX1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
VPS33AQ96AX1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
VPS33AQ96AX1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
VPS33AQ96AX1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
VPS33AQ96AX1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VPS33AQ96AX1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VPS33AQ96AX1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 AC092127.1-201ENST00000567093 3455 ntBASIC15.45■□□□□ 0.06
VPS33AQ96AX1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms