Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC024267.1-201ENST00000582320 895 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 IFNL3P1-201ENST00000595082 501 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
SYNE2Q8WXH0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 RNASEH2CP1-201ENST00000454281 502 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 RNF7-205ENST00000480908 782 ntTSL 4 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 MIR4783-201ENST00000580343 82 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 RN7SL672P-201ENST00000474091 317 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC004923.3-201ENST00000527532 355 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 MIR3677-201ENST00000578964 60 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC073413.1-201ENST00000603927 732 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AHCYP4-201ENST00000419201 1315 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 DRD5P1-201ENST00000456605 1438 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC006529.1-201ENST00000459978 637 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 ALG10-202ENST00000538927 571 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 MIR4254-201ENST00000581063 76 ntBASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNE2Q8WXH0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms