Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 RNA5SP410-201ENST00000516285 106 ntBASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 AC003101.2-201ENST00000612557 442 ntBASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 AC018529.1-201ENST00000613063 361 ntBASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 KLF2P3-201ENST00000451977 1087 ntBASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 AC125807.1-201ENST00000483097 614 ntBASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 MIR4453-201ENST00000584019 89 ntBASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMARCC2Q8TAQ2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 HMGN1P19-201ENST00000436976 333 ntBASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 DUX4L27-201ENST00000554796 1261 ntBASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 AC051619.7-201ENST00000568314 623 ntBASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 AC013268.4-201ENST00000637413 2228 ntBASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCC2Q8TAQ2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms