Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 AC010491.1-201ENST00000563101 2797 ntBASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 AL009178.2-201ENST00000597278 2719 ntBASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CFAP61Q8NHU2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 AC074386.1-202ENST00000463561 864 ntBASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 AC092919.2-201ENST00000623631 1645 ntBASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFAP61Q8NHU2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 PDPK2P-202ENST00000562415 1191 ntBASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 AC040169.1-201ENST00000565382 521 ntBASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.32■□□□□ 0.2
CFAP61Q8NHU2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms