Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 AC132192.2-201ENST00000596206 1147 ntBASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 AC006453.1-201ENST00000636037 1257 ntBASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL22A1Q8NFW1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 AC006335.1-201ENST00000445200 547 ntBASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 RNMTL1P1-201ENST00000454103 560 ntBASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 AC078925.2-201ENST00000624013 1973 ntBASIC20.81■□□□□ 0.92
COL22A1Q8NFW1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.8■□□□□ 0.92
COL22A1Q8NFW1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 AC005324.6-201ENST00000587972 613 ntBASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 KRT8P4-201ENST00000509735 1454 ntBASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL22A1Q8NFW1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 IGHV3-37-201ENST00000518544 340 ntBASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 AC025181.2-201ENST00000606994 802 ntBASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 AC004899.1-201ENST00000424687 1714 ntBASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL22A1Q8NFW1 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms