Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 AC107890.1-201ENST00000422478 521 ntBASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 AL133215.2-201ENST00000609242 977 ntBASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC148Q8NFR7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 AC140878.1-201ENST00000565277 250 ntBASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 CETN4P-206ENST00000642099 2168 ntBASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC148Q8NFR7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 BNIP3P1-202ENST00000550043 1585 ntBASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 AC112504.1-201ENST00000623415 1841 ntBASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 SPDYE17-201ENST00000412399 783 ntBASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 PMS2P2-201ENST00000425039 1128 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms