Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AL596442.2-201ENST00000610240 980 ntBASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AL691403.2-201ENST00000618460 490 ntBASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SRFBP1Q8NEF9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 AL365203.3-201ENST00000609742 2057 ntBASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 RPS8P6-201ENST00000426177 609 ntBASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 AL512356.2-201ENST00000546955 174 ntBASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 AC026150.2-201ENST00000564693 1156 ntBASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 AL035456.1-201ENST00000456064 1369 ntBASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRFBP1Q8NEF9 AC112504.1-201ENST00000623415 1841 ntBASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.33■□□□□ 0.05
SRFBP1Q8NEF9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 GPS2P2-201ENST00000430745 888 ntBASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.33■□□□□ 0.04
SRFBP1Q8NEF9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms