Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 PHKG1P2-201ENST00000457537 863 ntBASIC16.41■□□□□ 0.22
RTL3Q8N8U3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 AL390955.2-201ENST00000603032 514 ntBASIC16.41■□□□□ 0.22
RTL3Q8N8U3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.41■□□□□ 0.22
RTL3Q8N8U3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RTL3Q8N8U3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 AC018892.3-201ENST00000623986 2499 ntBASIC16.4■□□□□ 0.22
RTL3Q8N8U3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 AC100757.3-201ENST00000622361 1406 ntBASIC16.4■□□□□ 0.22
RTL3Q8N8U3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 IGHV3-42-201ENST00000520410 361 ntBASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 AL033527.5-202ENST00000641632 1098 ntBASIC16.4■□□□□ 0.22
RTL3Q8N8U3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL3Q8N8U3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTL3Q8N8U3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTL3Q8N8U3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.39■□□□□ 0.22
RTL3Q8N8U3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AP005117.1-202ENST00000581724 1908 ntBASIC16.39■□□□□ 0.21
RTL3Q8N8U3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms