Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 TNRC18P2-201ENST00000417666 2714 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 PTCHD3P3-201ENST00000403073 906 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AC254562.1-201ENST00000417586 456 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 MTCYBP15-201ENST00000433123 1127 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 IL12A-205ENST00000480787 863 ntTSL 3 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AC108751.1-201ENST00000490852 363 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AC136632.2-201ENST00000512891 861 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AP002490.2-201ENST00000524791 560 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AC011467.4-201ENST00000594891 528 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 TUBB8P12-201ENST00000308911 1335 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 TUBB7P-202ENST00000428444 1305 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 TUBB8P7-204ENST00000567960 1332 ntBASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFCAB3Q8N7B9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 MCCD1P2-201ENST00000423228 335 ntBASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 FAM8A3P-201ENST00000427218 844 ntBASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 CSNK1A1P3-201ENST00000504105 330 ntBASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AL162574.2-201ENST00000614618 657 ntBASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AL805961.1-202ENST00000641562 540 ntBASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AC008033.3-201ENST00000612531 1407 ntBASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EFCAB3Q8N7B9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms