Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 TOMM22P5-201ENST00000416399 439 ntBASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 KRT18P64-201ENST00000434946 1219 ntBASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AL583810.1-201ENST00000553344 1045 ntBASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AC124283.3-201ENST00000570869 594 ntBASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS3Q8IXF0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 AC099336.1-201ENST00000417053 1171 ntBASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 ACTBP11-201ENST00000436287 1126 ntBASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 BCRP2-202ENST00000447763 634 ntBASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 BCRP6-201ENST00000510112 632 ntBASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 BCRP7-201ENST00000511549 544 ntBASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 AC106886.4-201ENST00000623557 2502 ntBASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS3Q8IXF0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 AC134915.1-201ENST00000426461 574 ntBASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 SLED1-202ENST00000512051 380 ntBASIC16.48■□□□□ 0.23
NPAS3Q8IXF0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms