Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 SPDYE17-201ENST00000412399 783 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 TREML5P-201ENST00000421694 576 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 AC027369.6-201ENST00000525520 931 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 AL138828.2-201ENST00000615812 383 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 CETN4P-206ENST00000642099 2168 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 AC132872.4-202ENST00000622924 2756 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 KRT8P37-201ENST00000451609 1420 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 REXO1L1P-202ENST00000608646 1974 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 SPDYE12P-201ENST00000618416 771 ntBASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 KRT8P12-202ENST00000472924 1397 ntBASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.85■□□□□ 0.29
SCUBE3Q8IX30 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 AC092580.3-201ENST00000430932 139 ntBASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 AKR1B10P2-201ENST00000577332 927 ntBASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms