Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 AC007967.2-201ENST00000432613 625 ntBASIC14.35□□□□□ -0.11
LRRC28Q86X40 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 AC064836.3-201ENST00000607928 673 ntBASIC14.35□□□□□ -0.11
LRRC28Q86X40 AC010654.1-201ENST00000615722 808 ntBASIC14.35□□□□□ -0.11
LRRC28Q86X40 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 CICP13-201ENST00000422015 2789 ntBASIC14.35□□□□□ -0.11
LRRC28Q86X40 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 CICP24-201ENST00000605464 2705 ntBASIC14.35□□□□□ -0.11
LRRC28Q86X40 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 GPAA1P2-202ENST00000606848 1787 ntBASIC14.34□□□□□ -0.11
LRRC28Q86X40 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 PAWRP1-201ENST00000451083 565 ntBASIC14.34□□□□□ -0.11
LRRC28Q86X40 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 PGAM5P1-201ENST00000518923 814 ntBASIC14.34□□□□□ -0.11
LRRC28Q86X40 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRC28Q86X40 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRC28Q86X40 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRC28Q86X40 AC023908.3-201ENST00000564211 3047 ntBASIC14.33□□□□□ -0.11
LRRC28Q86X40 LINC01101-201ENST00000622953 1884 ntBASIC14.33□□□□□ -0.11
LRRC28Q86X40 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRC28Q86X40 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
LRRC28Q86X40 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms