Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.03■□□□□ 0.16
LDB1Q86U70 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.03■□□□□ 0.16
LDB1Q86U70 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.03■□□□□ 0.16
LDB1Q86U70 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.03■□□□□ 0.16
LDB1Q86U70 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LDB1Q86U70 HLA-H-201ENST00000383620 1096 ntBASIC16.03■□□□□ 0.16
LDB1Q86U70 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.03■□□□□ 0.16
LDB1Q86U70 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.03■□□□□ 0.16
LDB1Q86U70 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.03■□□□□ 0.16
LDB1Q86U70 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.03■□□□□ 0.16
LDB1Q86U70 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LDB1Q86U70 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
LDB1Q86U70 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.03■□□□□ 0.16
LDB1Q86U70 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.03■□□□□ 0.16
LDB1Q86U70 AC055717.3-201ENST00000622967 595 ntBASIC16.03■□□□□ 0.16
LDB1Q86U70 AC084121.4-201ENST00000641598 221 ntBASIC16.03■□□□□ 0.16
LDB1Q86U70 AF228730.8-201ENST00000642140 221 ntBASIC16.03■□□□□ 0.16
LDB1Q86U70 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 BNIP3P1-202ENST00000550043 1585 ntBASIC16.03■□□□□ 0.16
LDB1Q86U70 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LDB1Q86U70 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 AL691432.1-201ENST00000596308 1422 ntBASIC16.02■□□□□ 0.16
LDB1Q86U70 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.02■□□□□ 0.16
LDB1Q86U70 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.02■□□□□ 0.16
LDB1Q86U70 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.02■□□□□ 0.16
LDB1Q86U70 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.02■□□□□ 0.16
LDB1Q86U70 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LDB1Q86U70 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.02■□□□□ 0.16
LDB1Q86U70 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.02■□□□□ 0.16
LDB1Q86U70 AC211486.1-202ENST00000416371 468 ntBASIC16.02■□□□□ 0.16
LDB1Q86U70 AL627223.1-201ENST00000416693 442 ntBASIC16.02■□□□□ 0.16
LDB1Q86U70 KRT18P32-201ENST00000424695 1287 ntBASIC16.02■□□□□ 0.16
LDB1Q86U70 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.02■□□□□ 0.16
LDB1Q86U70 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 AC211476.1-201ENST00000503899 468 ntBASIC16.02■□□□□ 0.16
LDB1Q86U70 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.02■□□□□ 0.16
LDB1Q86U70 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.02■□□□□ 0.16
LDB1Q86U70 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
LDB1Q86U70 RARRES2P9-201ENST00000565168 469 ntBASIC16.02■□□□□ 0.16
LDB1Q86U70 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LDB1Q86U70 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.02■□□□□ 0.16
LDB1Q86U70 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LDB1Q86U70 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LDB1Q86U70 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.02■□□□□ 0.15
LDB1Q86U70 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LDB1Q86U70 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LDB1Q86U70 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LDB1Q86U70 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
LDB1Q86U70 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LDB1Q86U70 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LDB1Q86U70 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.02■□□□□ 0.15
LDB1Q86U70 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LDB1Q86U70 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LDB1Q86U70 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.01■□□□□ 0.15
LDB1Q86U70 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 AC144831.1-201ENST00000573312 2656 ntBASIC16.01■□□□□ 0.15
LDB1Q86U70 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LDB1Q86U70 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms