Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 AL603832.2-201ENST00000566195 2125 ntBASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 HAUS4P1-201ENST00000406739 1145 ntBASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 AC140878.1-201ENST00000565277 250 ntBASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP54Q7Z3B4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 AC107890.1-201ENST00000422478 521 ntBASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 AC125807.1-201ENST00000483097 614 ntBASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.85□□□□□ -0.03
NUP54Q7Z3B4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms