Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 ELL2P1-201ENST00000413990 1906 ntBASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 YBX1P5-201ENST00000509441 847 ntBASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 AC005829.1-201ENST00000570002 483 ntBASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HIST2H3AQ71DI3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms