Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 MIR4469-201ENST00000583919 79 ntBASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NHLRC1Q6VVB1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.46□□□□□ -0.1
NHLRC1Q6VVB1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 AC004461.1-201ENST00000412461 403 ntBASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 BX842568.4-201ENST00000421222 227 ntBASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 FAM58DP-201ENST00000428076 619 ntBASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 AL592309.1-201ENST00000443127 649 ntBASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 TIMM8BP1-201ENST00000452384 211 ntBASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NHLRC1Q6VVB1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms