Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL020989.1-201ENST00000422979 469 ntBASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 ALG1L5P-201ENST00000482043 771 ntBASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AC122714.2-201ENST00000502787 707 ntBASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AP002490.2-201ENST00000524791 560 ntBASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AD001527.2-201ENST00000622994 785 ntBASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 ELK2BP-201ENST00000415014 1224 ntBASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AC096633.1-201ENST00000422446 749 ntBASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AC103564.2-201ENST00000432853 1299 ntBASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AC092865.6-201ENST00000642101 219 ntBASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AP003680.1-201ENST00000598970 3660 ntBASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 AC006504.4-201ENST00000592118 1568 ntBASIC16.81■□□□□ 0.28
FOXR1Q6PIV2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 HTR5BP-201ENST00000430851 1154 ntBASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms