Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 TFAMP1-201ENST00000412727 736 ntBASIC14.64□□□□□ -0.07
NIPAL3Q6P499 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 ACTG1P14-201ENST00000446382 1122 ntBASIC14.64□□□□□ -0.07
NIPAL3Q6P499 CEND1P1-201ENST00000451006 455 ntBASIC14.64□□□□□ -0.07
NIPAL3Q6P499 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 FAM86C2P-203ENST00000528684 1004 ntBASIC14.64□□□□□ -0.07
NIPAL3Q6P499 AL135744.1-201ENST00000565098 629 ntBASIC14.64□□□□□ -0.07
NIPAL3Q6P499 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SSR4P1-203ENST00000599569 2260 ntBASIC14.63□□□□□ -0.07
NIPAL3Q6P499 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 GPX1P2-201ENST00000429271 606 ntBASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SPDYE11-202ENST00000450699 704 ntBASIC14.63□□□□□ -0.07
NIPAL3Q6P499 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SPDYE9P-201ENST00000570642 692 ntBASIC14.63□□□□□ -0.07
NIPAL3Q6P499 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SPDYE10P-202ENST00000612005 668 ntBASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SPDYE8P-202ENST00000612377 668 ntBASIC14.63□□□□□ -0.07
NIPAL3Q6P499 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 AKAP8P1-201ENST00000434743 1349 ntBASIC14.63□□□□□ -0.07
NIPAL3Q6P499 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.63□□□□□ -0.07
NIPAL3Q6P499 ELL2P1-201ENST00000413990 1906 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms