Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 AC026979.3-201ENST00000607315 403 ntBASIC16.63■□□□□ 0.25
RAB6CQ53S08 AL589739.1-201ENST00000607720 493 ntBASIC16.63■□□□□ 0.25
RAB6CQ53S08 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 KLF2P3-201ENST00000451977 1087 ntBASIC16.62■□□□□ 0.25
RAB6CQ53S08 AC125807.1-201ENST00000483097 614 ntBASIC16.62■□□□□ 0.25
RAB6CQ53S08 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 FO538757.1-201ENST00000623083 1397 ntBASIC16.62■□□□□ 0.25
RAB6CQ53S08 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB6CQ53S08 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB6CQ53S08 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 AC136621.1-201ENST00000624017 2304 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 CNN2P2-201ENST00000443536 909 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 CNN2P3-201ENST00000450201 906 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 PHKG1P2-201ENST00000457537 863 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 AL390955.2-201ENST00000603032 514 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 AC106028.4-201ENST00000614509 607 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 AL136317.3-201ENST00000618497 906 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB6CQ53S08 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 AL035456.1-201ENST00000456064 1369 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 KRT8P12-202ENST00000472924 1397 ntBASIC16.61■□□□□ 0.25
RAB6CQ53S08 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB6CQ53S08 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms