Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 HNRNPUP1-201ENST00000554987 333 ntBASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 MIR4313-201ENST00000580760 101 ntBASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 AC073592.8-201ENST00000624126 511 ntBASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.88□□□□□ -0.03
PRICKLE4Q2TBC4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 AC105917.1-201ENST00000506637 2539 ntBASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 AL645939.2-201ENST00000427340 991 ntBASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 AC097359.3-201ENST00000603982 1210 ntBASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 AL158211.3-201ENST00000607385 239 ntBASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 TEX28P1-201ENST00000613479 1221 ntBASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 TEX28P2-201ENST00000617764 1221 ntBASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
PRICKLE4Q2TBC4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 AC092580.3-201ENST00000430932 139 ntBASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 AC097493.3-201ENST00000509725 367 ntBASIC14.86□□□□□ -0.03
PRICKLE4Q2TBC4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms