Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 MIR4313-201ENST00000580760 101 ntBASIC19.23■□□□□ 0.67
RFX7Q2KHR2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 AC074044.1-201ENST00000609673 707 ntBASIC19.23■□□□□ 0.67
RFX7Q2KHR2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 AC098614.1-201ENST00000368528 745 ntBASIC19.22■□□□□ 0.67
RFX7Q2KHR2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 AC079328.2-201ENST00000561241 3354 ntBASIC19.22■□□□□ 0.67
RFX7Q2KHR2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RFX7Q2KHR2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 AC079776.1-201ENST00000401540 1152 ntBASIC19.21■□□□□ 0.67
RFX7Q2KHR2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms