Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.61■□□□□ 0.41
UBXN1Q04323 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.61■□□□□ 0.41
UBXN1Q04323 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.61■□□□□ 0.41
UBXN1Q04323 KRT19P2-202ENST00000557173 1012 ntBASIC17.61■□□□□ 0.41
UBXN1Q04323 AL109954.1-202ENST00000564051 2148 ntBASIC17.61■□□□□ 0.41
UBXN1Q04323 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.61■□□□□ 0.41
UBXN1Q04323 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UBXN1Q04323 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.61■□□□□ 0.41
UBXN1Q04323 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.61■□□□□ 0.41
UBXN1Q04323 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.61■□□□□ 0.41
UBXN1Q04323 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBXN1Q04323 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.61■□□□□ 0.41
UBXN1Q04323 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UBXN1Q04323 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
UBXN1Q04323 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
UBXN1Q04323 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.6■□□□□ 0.41
UBXN1Q04323 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.6■□□□□ 0.41
UBXN1Q04323 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.6■□□□□ 0.41
UBXN1Q04323 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.6■□□□□ 0.41
UBXN1Q04323 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 SLC25A6P4-201ENST00000586535 553 ntBASIC17.6■□□□□ 0.41
UBXN1Q04323 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 AC105250.1-201ENST00000509378 2057 ntBASIC17.6■□□□□ 0.41
UBXN1Q04323 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 AC138035.3-201ENST00000622706 2791 ntBASIC17.6■□□□□ 0.41
UBXN1Q04323 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.6■□□□□ 0.41
UBXN1Q04323 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBXN1Q04323 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.6■□□□□ 0.41
UBXN1Q04323 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
UBXN1Q04323 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.59■□□□□ 0.41
UBXN1Q04323 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 AC090616.6-203ENST00000579186 1945 ntBASIC17.59■□□□□ 0.41
UBXN1Q04323 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
UBXN1Q04323 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.59■□□□□ 0.41
UBXN1Q04323 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.59■□□□□ 0.41
UBXN1Q04323 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 AL662844.1-201ENST00000546340 181 ntBASIC17.59■□□□□ 0.41
UBXN1Q04323 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.59■□□□□ 0.41
UBXN1Q04323 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.59■□□□□ 0.41
UBXN1Q04323 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.59■□□□□ 0.41
UBXN1Q04323 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 AC064836.3-201ENST00000607928 673 ntBASIC17.59■□□□□ 0.41
UBXN1Q04323 AL161645.1-201ENST00000622716 1255 ntBASIC17.59■□□□□ 0.41
UBXN1Q04323 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UBXN1Q04323 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
UBXN1Q04323 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
UBXN1Q04323 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.59■□□□□ 0.41
UBXN1Q04323 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBXN1Q04323 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.59■□□□□ 0.41
UBXN1Q04323 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms