Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 MIR1908-201ENST00000410394 80 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.78□□□□□ -0.2
ABCA4P78363 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.78□□□□□ -0.2
ABCA4P78363 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 AL583810.1-201ENST00000553344 1045 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 AC103810.3-201ENST00000583567 96 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.78□□□□□ -0.2
ABCA4P78363 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 KRT8P37-201ENST00000451609 1420 ntBASIC13.77□□□□□ -0.2
ABCA4P78363 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
ABCA4P78363 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
ABCA4P78363 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
ABCA4P78363 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
ABCA4P78363 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.77□□□□□ -0.2
ABCA4P78363 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
ABCA4P78363 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.77□□□□□ -0.2
ABCA4P78363 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
ABCA4P78363 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.77□□□□□ -0.2
ABCA4P78363 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.77□□□□□ -0.2
ABCA4P78363 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ABCA4P78363 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
ABCA4P78363 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.77□□□□□ -0.21
ABCA4P78363 TARDBPP1-201ENST00000442013 1203 ntBASIC13.77□□□□□ -0.21
ABCA4P78363 AP002490.2-201ENST00000524791 560 ntBASIC13.77□□□□□ -0.21
ABCA4P78363 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCA4P78363 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCA4P78363 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCA4P78363 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.77□□□□□ -0.21
ABCA4P78363 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
ABCA4P78363 AC080080.1-201ENST00000625121 2420 ntBASIC13.77□□□□□ -0.21
ABCA4P78363 CYP4F24P-201ENST00000586049 1580 ntBASIC13.77□□□□□ -0.21
ABCA4P78363 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.77□□□□□ -0.21
ABCA4P78363 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 AC105020.1-201ENST00000435356 2205 ntBASIC13.77□□□□□ -0.21
ABCA4P78363 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ABCA4P78363 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ABCA4P78363 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ABCA4P78363 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.77□□□□□ -0.21
ABCA4P78363 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCA4P78363 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ABCA4P78363 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ABCA4P78363 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCA4P78363 AC022211.2-201ENST00000585075 2527 ntBASIC13.76□□□□□ -0.21
ABCA4P78363 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCA4P78363 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCA4P78363 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ABCA4P78363 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.76□□□□□ -0.21
ABCA4P78363 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.76□□□□□ -0.21
ABCA4P78363 EEF1DP4-201ENST00000446006 880 ntBASIC13.76□□□□□ -0.21
ABCA4P78363 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.76□□□□□ -0.21
ABCA4P78363 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.76□□□□□ -0.21
ABCA4P78363 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCA4P78363 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ABCA4P78363 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCA4P78363 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCA4P78363 AC018695.7-201ENST00000624587 2492 ntBASIC13.76□□□□□ -0.21
ABCA4P78363 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.76□□□□□ -0.21
ABCA4P78363 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms