Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ACTA1P68133 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTA1P68133 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTA1P68133 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTA1P68133 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
ACTA1P68133 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTA1P68133 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTA1P68133 AC090616.6-203ENST00000579186 1945 ntBASIC14.35□□□□□ -0.11
ACTA1P68133 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTA1P68133 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.35□□□□□ -0.11
ACTA1P68133 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTA1P68133 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 PRSS29P-201ENST00000440800 595 ntBASIC14.34□□□□□ -0.11
ACTA1P68133 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.34□□□□□ -0.11
ACTA1P68133 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.34□□□□□ -0.11
ACTA1P68133 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 AC004790.2-201ENST00000623588 572 ntBASIC14.34□□□□□ -0.11
ACTA1P68133 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ACTA1P68133 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ACTA1P68133 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTA1P68133 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTA1P68133 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
ACTA1P68133 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ACTA1P68133 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ACTA1P68133 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ACTA1P68133 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.33□□□□□ -0.11
ACTA1P68133 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.33□□□□□ -0.11
ACTA1P68133 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.33□□□□□ -0.11
ACTA1P68133 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.33□□□□□ -0.11
ACTA1P68133 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
ACTA1P68133 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTA1P68133 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTA1P68133 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTA1P68133 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
ACTA1P68133 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.33□□□□□ -0.12
ACTA1P68133 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.33□□□□□ -0.12
ACTA1P68133 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.33□□□□□ -0.12
ACTA1P68133 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
ACTA1P68133 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ACTA1P68133 IFNL4P1-201ENST00000607083 540 ntBASIC14.33□□□□□ -0.12
ACTA1P68133 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ACTA1P68133 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTA1P68133 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTA1P68133 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms