Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC107918.4-202ENST00000641623 219 ntBASIC18.05■□□□□ 0.48
TPM4P67936 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 CICP13-201ENST00000422015 2789 ntBASIC18.05■□□□□ 0.48
TPM4P67936 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TPM4P67936 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.04■□□□□ 0.48
TPM4P67936 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.04■□□□□ 0.48
TPM4P67936 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 PMS2P4-201ENST00000412466 1052 ntBASIC18.04■□□□□ 0.48
TPM4P67936 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.04■□□□□ 0.48
TPM4P67936 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.04■□□□□ 0.48
TPM4P67936 MIR3909-201ENST00000579518 119 ntBASIC18.04■□□□□ 0.48
TPM4P67936 AL031055.1-201ENST00000606362 631 ntBASIC18.04■□□□□ 0.48
TPM4P67936 AC008667.4-201ENST00000607370 168 ntBASIC18.04■□□□□ 0.48
TPM4P67936 AC091076.1-201ENST00000610741 619 ntBASIC18.04■□□□□ 0.48
TPM4P67936 MIR1199-201ENST00000621445 119 ntBASIC18.04■□□□□ 0.48
TPM4P67936 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.04■□□□□ 0.48
TPM4P67936 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.04■□□□□ 0.48
TPM4P67936 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM4P67936 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
TPM4P67936 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.03■□□□□ 0.48
TPM4P67936 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 AC138035.3-201ENST00000622706 2791 ntBASIC18.03■□□□□ 0.48
TPM4P67936 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TPM4P67936 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 RNU1-129P-201ENST00000384064 167 ntBASIC18.03■□□□□ 0.48
TPM4P67936 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.03■□□□□ 0.48
TPM4P67936 U1.21-201ENST00000580816 167 ntBASIC18.03■□□□□ 0.48
TPM4P67936 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM4P67936 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TPM4P67936 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM4P67936 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM4P67936 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM4P67936 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
TPM4P67936 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TPM4P67936 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM4P67936 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM4P67936 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM4P67936 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TPM4P67936 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM4P67936 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TPM4P67936 MRPL20P1-201ENST00000400819 433 ntBASIC18.02■□□□□ 0.48
TPM4P67936 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.02■□□□□ 0.48
TPM4P67936 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM4P67936 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TPM4P67936 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM4P67936 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TPM4P67936 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TPM4P67936 AC021087.4-201ENST00000563761 564 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms