Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RPL39P62891 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
RPL39P62891 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
RPL39P62891 HCG4-201ENST00000418983 998 ntBASIC11.4□□□□□ -0.58
RPL39P62891 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.4□□□□□ -0.58
RPL39P62891 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.4□□□□□ -0.58
RPL39P62891 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.4□□□□□ -0.58
RPL39P62891 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.4□□□□□ -0.58
RPL39P62891 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.4□□□□□ -0.58
RPL39P62891 AL160237.2-201ENST00000556165 472 ntBASIC11.4□□□□□ -0.58
RPL39P62891 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.4□□□□□ -0.58
RPL39P62891 LINC01023-201ENST00000606054 436 ntBASIC11.4□□□□□ -0.58
RPL39P62891 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.4□□□□□ -0.58
RPL39P62891 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 AC105250.1-201ENST00000509378 2057 ntBASIC11.4□□□□□ -0.58
RPL39P62891 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RPL39P62891 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.4□□□□□ -0.59
RPL39P62891 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.4□□□□□ -0.59
RPL39P62891 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RPL39P62891 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 AC007292.2-201ENST00000593524 1812 ntBASIC11.39□□□□□ -0.59
RPL39P62891 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
RPL39P62891 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 HAUS4P1-201ENST00000406739 1145 ntBASIC11.39□□□□□ -0.59
RPL39P62891 AL031133.1-201ENST00000406807 723 ntBASIC11.39□□□□□ -0.59
RPL39P62891 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 AC132008.2-207ENST00000454517 770 ntBASIC11.39□□□□□ -0.59
RPL39P62891 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 AC139887.3-201ENST00000568585 713 ntBASIC11.39□□□□□ -0.59
RPL39P62891 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 AC005412.3-201ENST00000580309 715 ntBASIC11.39□□□□□ -0.59
RPL39P62891 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.39□□□□□ -0.59
RPL39P62891 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
RPL39P62891 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms