Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 AL691432.1-201ENST00000596308 1422 ntBASIC16.71■□□□□ 0.27
CDH6P55285 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH6P55285 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CDH6P55285 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH6P55285 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 KRT18P13-201ENST00000400056 1290 ntBASIC16.71■□□□□ 0.27
CDH6P55285 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH6P55285 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CDH6P55285 AC005237.2-201ENST00000434368 219 ntBASIC16.71■□□□□ 0.27
CDH6P55285 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH6P55285 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH6P55285 AC243562.2-201ENST00000561247 970 ntBASIC16.71■□□□□ 0.27
CDH6P55285 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.71■□□□□ 0.27
CDH6P55285 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH6P55285 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH6P55285 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH6P55285 AC084121.4-201ENST00000641598 221 ntBASIC16.71■□□□□ 0.27
CDH6P55285 AF228730.8-201ENST00000642140 221 ntBASIC16.71■□□□□ 0.27
CDH6P55285 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDH6P55285 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CDH6P55285 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH6P55285 AP3S2-216ENST00000617003 1561 ntBASIC16.71■□□□□ 0.27
CDH6P55285 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH6P55285 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CDH6P55285 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH6P55285 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CDH6P55285 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH6P55285 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH6P55285 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH6P55285 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH6P55285 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH6P55285 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH6P55285 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
CDH6P55285 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH6P55285 AL513210.1-201ENST00000629608 234 ntBASIC16.7■□□□□ 0.26
CDH6P55285 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH6P55285 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH6P55285 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH6P55285 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH6P55285 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CDH6P55285 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH6P55285 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH6P55285 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDH6P55285 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH6P55285 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.69■□□□□ 0.26
CDH6P55285 AC004461.1-201ENST00000412461 403 ntBASIC16.69■□□□□ 0.26
CDH6P55285 AC211486.1-202ENST00000416371 468 ntBASIC16.69■□□□□ 0.26
CDH6P55285 AC211476.1-201ENST00000503899 468 ntBASIC16.69■□□□□ 0.26
CDH6P55285 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH6P55285 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH6P55285 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH6P55285 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH6P55285 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH6P55285 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDH6P55285 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDH6P55285 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH6P55285 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH6P55285 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH6P55285 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 BNIP3P1-202ENST00000550043 1585 ntBASIC16.68■□□□□ 0.26
CDH6P55285 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.68■□□□□ 0.26
CDH6P55285 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH6P55285 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 AL136982.4-201ENST00000437689 1740 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms