Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
PDX1P52945 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.57■□□□□ 0.08
PDX1P52945 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.57■□□□□ 0.08
PDX1P52945 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.57■□□□□ 0.08
PDX1P52945 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.57■□□□□ 0.08
PDX1P52945 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.57■□□□□ 0.08
PDX1P52945 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.57■□□□□ 0.08
PDX1P52945 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 AC005052.1-201ENST00000625181 2492 ntBASIC15.57■□□□□ 0.08
PDX1P52945 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.57■□□□□ 0.08
PDX1P52945 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.57■□□□□ 0.08
PDX1P52945 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDX1P52945 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 DOC2GP-204ENST00000639052 2548 ntBASIC15.56■□□□□ 0.08
PDX1P52945 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
PDX1P52945 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDX1P52945 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.56■□□□□ 0.08
PDX1P52945 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.56■□□□□ 0.08
PDX1P52945 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.56■□□□□ 0.08
PDX1P52945 AC020765.3-201ENST00000613051 740 ntBASIC15.56■□□□□ 0.08
PDX1P52945 AL162274.1-201ENST00000617191 1098 ntBASIC15.56■□□□□ 0.08
PDX1P52945 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
PDX1P52945 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
PDX1P52945 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDX1P52945 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.56■□□□□ 0.08
PDX1P52945 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
PDX1P52945 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDX1P52945 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PDX1P52945 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PDX1P52945 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.55■□□□□ 0.08
PDX1P52945 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
PDX1P52945 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 ACA64.2-201ENST00000459014 129 ntBASIC15.55■□□□□ 0.08
PDX1P52945 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.55■□□□□ 0.08
PDX1P52945 AC023310.3-201ENST00000557027 670 ntBASIC15.55■□□□□ 0.08
PDX1P52945 AC100756.1-201ENST00000562736 682 ntBASIC15.55■□□□□ 0.08
PDX1P52945 AC138749.3-201ENST00000567691 622 ntBASIC15.55■□□□□ 0.08
PDX1P52945 AC026979.3-201ENST00000607315 403 ntBASIC15.55■□□□□ 0.08
PDX1P52945 AC116165.1-201ENST00000611806 668 ntBASIC15.55■□□□□ 0.08
PDX1P52945 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.55■□□□□ 0.08
PDX1P52945 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.55■□□□□ 0.08
PDX1P52945 AL109936.8-201ENST00000641772 604 ntBASIC15.55■□□□□ 0.08
PDX1P52945 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PDX1P52945 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDX1P52945 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms