Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC23.52■■□□□ 1.36
KDM5CP41229 AC253536.4-201ENST00000440539 267 ntBASIC23.52■■□□□ 1.36
KDM5CP41229 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 AP003171.2-201ENST00000528208 925 ntBASIC23.52■■□□□ 1.36
KDM5CP41229 NKG7-204ENST00000595217 816 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC23.52■■□□□ 1.36
KDM5CP41229 AC106886.4-201ENST00000623557 2502 ntBASIC23.52■■□□□ 1.36
KDM5CP41229 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
KDM5CP41229 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
KDM5CP41229 SUN1-204ENST00000403868 978 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 KRTAP19-9P-201ENST00000421795 191 ntBASIC23.52■■□□□ 1.36
KDM5CP41229 PTPA-218ENST00000435132 618 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 RN7SL769P-201ENST00000469386 295 ntBASIC23.52■■□□□ 1.36
KDM5CP41229 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC23.52■■□□□ 1.36
KDM5CP41229 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM5CP41229 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM5CP41229 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.35
KDM5CP41229 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC23.51■■□□□ 1.35
KDM5CP41229 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 FLJ38576-201ENST00000623820 2459 ntBASIC23.51■■□□□ 1.35
KDM5CP41229 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC23.51■■□□□ 1.35
KDM5CP41229 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC23.51■■□□□ 1.35
KDM5CP41229 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC23.51■■□□□ 1.35
KDM5CP41229 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC23.51■■□□□ 1.35
KDM5CP41229 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC23.51■■□□□ 1.35
KDM5CP41229 UBL5-208ENST00000593087 320 ntTSL 3 BASIC23.51■■□□□ 1.35
KDM5CP41229 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC23.51■■□□□ 1.35
KDM5CP41229 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
KDM5CP41229 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM5CP41229 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
KDM5CP41229 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC23.5■■□□□ 1.35
KDM5CP41229 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC23.5■■□□□ 1.35
KDM5CP41229 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC23.5■■□□□ 1.35
KDM5CP41229 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 B9D1-203ENST00000395615 805 ntTSL 3 BASIC23.5■■□□□ 1.35
KDM5CP41229 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC23.5■■□□□ 1.35
KDM5CP41229 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC23.5■■□□□ 1.35
KDM5CP41229 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC23.5■■□□□ 1.35
KDM5CP41229 AC126915.1-201ENST00000522847 1038 ntBASIC23.5■■□□□ 1.35
KDM5CP41229 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
KDM5CP41229 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 RN7SL48P-201ENST00000579283 293 ntBASIC23.5■■□□□ 1.35
KDM5CP41229 ETV2-208ENST00000621247 941 ntTSL 5 BASIC23.5■■□□□ 1.35
KDM5CP41229 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC23.5■■□□□ 1.35
KDM5CP41229 AL354989.2-201ENST00000435838 1540 ntBASIC23.5■■□□□ 1.35
KDM5CP41229 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC23.5■■□□□ 1.35
KDM5CP41229 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM5CP41229 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.49■■□□□ 1.35
KDM5CP41229 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
KDM5CP41229 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM5CP41229 AC011676.5-201ENST00000624864 2660 ntBASIC23.49■■□□□ 1.35
KDM5CP41229 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
KDM5CP41229 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
KDM5CP41229 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
KDM5CP41229 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC23.49■■□□□ 1.35
KDM5CP41229 MPRIPP1-201ENST00000452433 1089 ntBASIC23.49■■□□□ 1.35
KDM5CP41229 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM5CP41229 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC23.49■■□□□ 1.35
KDM5CP41229 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC23.49■■□□□ 1.35
KDM5CP41229 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM5CP41229 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC23.49■■□□□ 1.35
KDM5CP41229 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM5CP41229 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM5CP41229 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM5CP41229 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms