Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGCLP35914 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGCLP35914 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCLP35914 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
HMGCLP35914 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HMGCLP35914 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGCLP35914 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGCLP35914 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.92■□□□□ 0.14
HMGCLP35914 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGCLP35914 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.92■□□□□ 0.14
HMGCLP35914 AL590560.3-201ENST00000623350 461 ntBASIC15.92■□□□□ 0.14
HMGCLP35914 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HMGCLP35914 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGCLP35914 AC008741.2-201ENST00000612792 3115 ntBASIC15.92■□□□□ 0.14
HMGCLP35914 AC087499.5-201ENST00000452760 1342 ntBASIC15.92■□□□□ 0.14
HMGCLP35914 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCLP35914 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCLP35914 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGCLP35914 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGCLP35914 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
HMGCLP35914 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCLP35914 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCLP35914 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGCLP35914 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGCLP35914 AC136604.1-201ENST00000418535 575 ntBASIC15.91■□□□□ 0.14
HMGCLP35914 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.91■□□□□ 0.14
HMGCLP35914 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCLP35914 CYMP-203ENST00000474680 1263 ntBASIC15.91■□□□□ 0.14
HMGCLP35914 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCLP35914 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGCLP35914 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.91■□□□□ 0.14
HMGCLP35914 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGCLP35914 AC100757.3-201ENST00000622361 1406 ntBASIC15.91■□□□□ 0.14
HMGCLP35914 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCLP35914 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 PRAL-201ENST00000624952 3286 ntBASIC15.91■□□□□ 0.14
HMGCLP35914 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
HMGCLP35914 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCLP35914 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCLP35914 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCLP35914 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCLP35914 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms