Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HOMER2P1-201ENST00000455653 964 ntBASIC11.87□□□□□ -0.51
CKS2P33552 YBX1P2-201ENST00000489612 999 ntBASIC11.87□□□□□ -0.51
CKS2P33552 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 LINC01238-205ENST00000567549 1107 ntBASIC11.87□□□□□ -0.51
CKS2P33552 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
CKS2P33552 AC091167.2-201ENST00000579581 588 ntBASIC11.87□□□□□ -0.51
CKS2P33552 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.87□□□□□ -0.51
CKS2P33552 AC139887.4-201ENST00000607877 719 ntBASIC11.87□□□□□ -0.51
CKS2P33552 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 TP73-AS1-210ENST00000637775 1455 ntBASIC11.87□□□□□ -0.51
CKS2P33552 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.87□□□□□ -0.51
CKS2P33552 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.86□□□□□ -0.51
CKS2P33552 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 BX664615.1-201ENST00000443558 458 ntBASIC11.86□□□□□ -0.51
CKS2P33552 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.86□□□□□ -0.51
CKS2P33552 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.86□□□□□ -0.51
CKS2P33552 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 AC104581.4-201ENST00000623126 3052 ntBASIC11.86□□□□□ -0.51
CKS2P33552 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
CKS2P33552 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
CKS2P33552 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS2P33552 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS2P33552 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CKS2P33552 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 U82695.1-201ENST00000635752 1889 ntBASIC11.85□□□□□ -0.51
CKS2P33552 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CKS2P33552 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
CKS2P33552 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CKS2P33552 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.85□□□□□ -0.51
CKS2P33552 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms