Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.95■□□□□ 0.3
CHRNA3P32297 AL031055.1-201ENST00000606362 631 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 AC026120.1-201ENST00000611536 926 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA3P32297 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA3P32297 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CHRNA3P32297 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA3P32297 KRT18P28-201ENST00000453838 1332 ntBASIC16.95■□□□□ 0.3
CHRNA3P32297 AC092850.2-201ENST00000623821 2697 ntBASIC16.94■□□□□ 0.3
CHRNA3P32297 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA3P32297 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA3P32297 AC092474.2-201ENST00000424288 719 ntBASIC16.94■□□□□ 0.3
CHRNA3P32297 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA3P32297 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.94■□□□□ 0.3
CHRNA3P32297 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA3P32297 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA3P32297 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA3P32297 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA3P32297 AC022145.2-201ENST00000598203 171 ntBASIC16.94■□□□□ 0.3
CHRNA3P32297 AC004835.2-201ENST00000603762 682 ntBASIC16.94■□□□□ 0.3
CHRNA3P32297 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA3P32297 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA3P32297 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA3P32297 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA3P32297 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA3P32297 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.93■□□□□ 0.3
CHRNA3P32297 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA3P32297 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CHRNA3P32297 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 TFAMP1-201ENST00000412727 736 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 PMS2P2-201ENST00000425039 1128 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 SPDYE11-202ENST00000450699 704 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.93■□□□□ 0.3
CHRNA3P32297 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 RARRES2P8-201ENST00000566335 367 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 SPDYE9P-201ENST00000570642 692 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 MIR3909-201ENST00000579518 119 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.93■□□□□ 0.3
CHRNA3P32297 SPDYE10P-202ENST00000612005 668 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 SPDYE8P-202ENST00000612377 668 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms