Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
HOXC8P31273 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC8P31273 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HOXC8P31273 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC8P31273 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC8P31273 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXC8P31273 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC8P31273 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC8P31273 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXC8P31273 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXC8P31273 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HOXC8P31273 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC8P31273 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC8P31273 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC8P31273 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 AL596087.1-201ENST00000400979 1969 ntBASIC17.23■□□□□ 0.35
HOXC8P31273 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC8P31273 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC8P31273 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC8P31273 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC8P31273 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.23■□□□□ 0.35
HOXC8P31273 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HOXC8P31273 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC8P31273 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC8P31273 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC8P31273 AP005019.2-201ENST00000615104 511 ntBASIC17.23■□□□□ 0.35
HOXC8P31273 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 AC069224.1-201ENST00000566372 1715 ntBASIC17.23■□□□□ 0.35
HOXC8P31273 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC8P31273 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC8P31273 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC8P31273 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXC8P31273 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HOXC8P31273 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
HOXC8P31273 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC8P31273 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.22■□□□□ 0.35
HOXC8P31273 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC8P31273 FAM8A2P-201ENST00000528813 1142 ntBASIC17.22■□□□□ 0.35
HOXC8P31273 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC8P31273 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.22■□□□□ 0.35
HOXC8P31273 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC8P31273 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC8P31273 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 MIR6787-201ENST00000616675 61 ntBASIC17.22■□□□□ 0.35
HOXC8P31273 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 AL138709.1-201ENST00000614840 1693 ntBASIC17.22■□□□□ 0.35
HOXC8P31273 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms