Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.29□□□□□ -0.12
CD40LGP29965 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.29□□□□□ -0.12
CD40LGP29965 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.29□□□□□ -0.12
CD40LGP29965 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CD40LGP29965 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.29□□□□□ -0.12
CD40LGP29965 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 AC132938.5-201ENST00000624980 1813 ntBASIC14.29□□□□□ -0.12
CD40LGP29965 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CD40LGP29965 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.28□□□□□ -0.12
CD40LGP29965 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CD40LGP29965 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 SPDYE15P-201ENST00000424157 909 ntBASIC14.28□□□□□ -0.12
CD40LGP29965 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.28□□□□□ -0.12
CD40LGP29965 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.28□□□□□ -0.12
CD40LGP29965 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.28□□□□□ -0.12
CD40LGP29965 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.28□□□□□ -0.12
CD40LGP29965 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 AC126365.1-201ENST00000578585 1514 ntBASIC14.28□□□□□ -0.12
CD40LGP29965 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CD40LGP29965 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40LGP29965 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40LGP29965 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.28□□□□□ -0.12
CD40LGP29965 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CD40LGP29965 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CD40LGP29965 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 HSPA7-201ENST00000445535 1927 ntBASIC14.27□□□□□ -0.12
CD40LGP29965 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.27□□□□□ -0.12
CD40LGP29965 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.27□□□□□ -0.12
CD40LGP29965 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.27□□□□□ -0.12
CD40LGP29965 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.27□□□□□ -0.12
CD40LGP29965 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms