Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
SHC1P29353 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.76□□□□□ -0.05
SHC1P29353 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 NFIC-211ENST00000641145 8399 ntBASIC14.76□□□□□ -0.05
SHC1P29353 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.76□□□□□ -0.05
SHC1P29353 KRT18P32-201ENST00000424695 1287 ntBASIC14.76□□□□□ -0.05
SHC1P29353 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.76□□□□□ -0.05
SHC1P29353 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.76□□□□□ -0.05
SHC1P29353 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.76□□□□□ -0.05
SHC1P29353 AC105233.2-201ENST00000523697 349 ntBASIC14.76□□□□□ -0.05
SHC1P29353 AF228730.5-201ENST00000530288 346 ntBASIC14.76□□□□□ -0.05
SHC1P29353 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.76□□□□□ -0.05
SHC1P29353 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHC1P29353 REXO1L8P-201ENST00000604378 1897 ntBASIC14.76□□□□□ -0.05
SHC1P29353 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SHC1P29353 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 AL136379.1-201ENST00000623471 2642 ntBASIC14.75□□□□□ -0.05
SHC1P29353 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.75□□□□□ -0.05
SHC1P29353 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.75□□□□□ -0.05
SHC1P29353 GPS2P2-201ENST00000430745 888 ntBASIC14.75□□□□□ -0.05
SHC1P29353 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.75□□□□□ -0.05
SHC1P29353 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 AC023141.5-201ENST00000458585 616 ntBASIC14.75□□□□□ -0.05
SHC1P29353 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 POU5F1P6-201ENST00000466990 990 ntBASIC14.75□□□□□ -0.05
SHC1P29353 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.75□□□□□ -0.05
SHC1P29353 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.75□□□□□ -0.05
SHC1P29353 KRT8P23-201ENST00000560090 1207 ntBASIC14.75□□□□□ -0.05
SHC1P29353 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.75□□□□□ -0.05
SHC1P29353 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.75□□□□□ -0.05
SHC1P29353 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.75□□□□□ -0.05
SHC1P29353 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.75□□□□□ -0.05
SHC1P29353 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.75□□□□□ -0.05
SHC1P29353 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.75□□□□□ -0.05
SHC1P29353 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SHC1P29353 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.75□□□□□ -0.05
SHC1P29353 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SHC1P29353 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SHC1P29353 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SHC1P29353 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms