Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTPN3P26045 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 AC254562.1-201ENST00000417586 456 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 AP006288.1-201ENST00000446065 395 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PTPN3P26045 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 BANF1P1-201ENST00000553684 263 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 AC026150.2-201ENST00000564693 1156 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 AC026979.3-201ENST00000607315 403 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 AC018529.1-201ENST00000613063 361 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 AC134684.3-201ENST00000641758 218 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN3P26045 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PTPN3P26045 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 CICP13-201ENST00000422015 2789 ntBASIC16.34■□□□□ 0.21
PTPN3P26045 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN3P26045 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PTPN3P26045 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN3P26045 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PTPN3P26045 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN3P26045 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 EEF1DP4-201ENST00000446006 880 ntBASIC16.34■□□□□ 0.21
PTPN3P26045 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.34■□□□□ 0.21
PTPN3P26045 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN3P26045 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN3P26045 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN3P26045 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PTPN3P26045 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN3P26045 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTPN3P26045 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PTPN3P26045 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.33■□□□□ 0.21
PTPN3P26045 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN3P26045 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN3P26045 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN3P26045 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN3P26045 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PTPN3P26045 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PTPN3P26045 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 KRT18P13-201ENST00000400056 1290 ntBASIC16.33■□□□□ 0.2
PTPN3P26045 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN3P26045 AL353705.2-201ENST00000428243 662 ntBASIC16.33■□□□□ 0.2
PTPN3P26045 CNN2P11-201ENST00000429351 262 ntBASIC16.33■□□□□ 0.2
PTPN3P26045 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN3P26045 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN3P26045 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN3P26045 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN3P26045 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms