Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.55□□□□□ -0.24
COL8A2P25067 CRB3P1-201ENST00000449338 276 ntBASIC13.55□□□□□ -0.24
COL8A2P25067 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.55□□□□□ -0.24
COL8A2P25067 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.55□□□□□ -0.24
COL8A2P25067 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.55□□□□□ -0.24
COL8A2P25067 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.55□□□□□ -0.24
COL8A2P25067 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.55□□□□□ -0.24
COL8A2P25067 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.55□□□□□ -0.24
COL8A2P25067 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.55□□□□□ -0.24
COL8A2P25067 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.55□□□□□ -0.24
COL8A2P25067 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
COL8A2P25067 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.55□□□□□ -0.24
COL8A2P25067 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.55□□□□□ -0.24
COL8A2P25067 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
COL8A2P25067 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
COL8A2P25067 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.55□□□□□ -0.24
COL8A2P25067 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.55□□□□□ -0.24
COL8A2P25067 BTBD7P1-201ENST00000447253 1453 ntBASIC13.55□□□□□ -0.24
COL8A2P25067 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.54□□□□□ -0.24
COL8A2P25067 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.54□□□□□ -0.24
COL8A2P25067 ZNF890P-202ENST00000530367 1156 ntBASIC13.54□□□□□ -0.24
COL8A2P25067 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.54□□□□□ -0.24
COL8A2P25067 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
COL8A2P25067 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 AL662799.1-202ENST00000614205 422 ntBASIC13.54□□□□□ -0.24
COL8A2P25067 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 AL391005.1-201ENST00000623953 2435 ntBASIC13.54□□□□□ -0.24
COL8A2P25067 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.54□□□□□ -0.24
COL8A2P25067 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 AC007541.1-201ENST00000570282 1469 ntBASIC13.54□□□□□ -0.24
COL8A2P25067 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
COL8A2P25067 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COL8A2P25067 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.53□□□□□ -0.24
COL8A2P25067 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COL8A2P25067 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.53□□□□□ -0.24
COL8A2P25067 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms