Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.77□□□□□ -0.2
TNFSF4P23510 PCDHA3-202ENST00000532566 4594 ntBASIC13.77□□□□□ -0.2
TNFSF4P23510 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.77□□□□□ -0.21
TNFSF4P23510 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TNFSF4P23510 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFSF4P23510 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFSF4P23510 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.77□□□□□ -0.21
TNFSF4P23510 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.77□□□□□ -0.21
TNFSF4P23510 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFSF4P23510 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.77□□□□□ -0.21
TNFSF4P23510 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFSF4P23510 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFSF4P23510 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.77□□□□□ -0.21
TNFSF4P23510 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TNFSF4P23510 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.77□□□□□ -0.21
TNFSF4P23510 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
TNFSF4P23510 AC106028.4-201ENST00000614509 607 ntBASIC13.77□□□□□ -0.21
TNFSF4P23510 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.77□□□□□ -0.21
TNFSF4P23510 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TNFSF4P23510 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TNFSF4P23510 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TNFSF4P23510 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TNFSF4P23510 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.76□□□□□ -0.21
TNFSF4P23510 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TNFSF4P23510 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.76□□□□□ -0.21
TNFSF4P23510 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TNFSF4P23510 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 AC008677.1-201ENST00000519230 1561 ntBASIC13.76□□□□□ -0.21
TNFSF4P23510 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.76□□□□□ -0.21
TNFSF4P23510 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.76□□□□□ -0.21
TNFSF4P23510 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 MIR648-201ENST00000385046 94 ntBASIC13.76□□□□□ -0.21
TNFSF4P23510 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 MTND6P24-201ENST00000440466 518 ntBASIC13.76□□□□□ -0.21
TNFSF4P23510 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.76□□□□□ -0.21
TNFSF4P23510 AC069120.2-201ENST00000524091 540 ntBASIC13.76□□□□□ -0.21
TNFSF4P23510 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.76□□□□□ -0.21
TNFSF4P23510 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.76□□□□□ -0.21
TNFSF4P23510 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.76□□□□□ -0.21
TNFSF4P23510 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TNFSF4P23510 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.76□□□□□ -0.21
TNFSF4P23510 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 OR2I1P-209ENST00000641730 5365 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 AC097376.2-205ENST00000610159 5334 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TNFSF4P23510 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.75□□□□□ -0.21
TNFSF4P23510 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.75□□□□□ -0.21
TNFSF4P23510 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms