Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VCLP18206 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VCLP18206 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VCLP18206 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 KRT18P28-201ENST00000453838 1332 ntBASIC16.2■□□□□ 0.18
VCLP18206 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.2■□□□□ 0.18
VCLP18206 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VCLP18206 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.2■□□□□ 0.18
VCLP18206 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
VCLP18206 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 TSEN15P1-201ENST00000423257 515 ntBASIC16.2■□□□□ 0.18
VCLP18206 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.2■□□□□ 0.18
VCLP18206 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.2■□□□□ 0.18
VCLP18206 AC069335.1-201ENST00000489972 472 ntBASIC16.2■□□□□ 0.18
VCLP18206 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 AC009093.7-201ENST00000623853 1223 ntBASIC16.2■□□□□ 0.18
VCLP18206 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.2■□□□□ 0.18
VCLP18206 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.2■□□□□ 0.18
VCLP18206 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.2■□□□□ 0.18
VCLP18206 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VCLP18206 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VCLP18206 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VCLP18206 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.2■□□□□ 0.18
VCLP18206 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.19■□□□□ 0.18
VCLP18206 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VCLP18206 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.19■□□□□ 0.18
VCLP18206 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
VCLP18206 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.19■□□□□ 0.18
VCLP18206 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.19■□□□□ 0.18
VCLP18206 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.19■□□□□ 0.18
VCLP18206 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.19■□□□□ 0.18
VCLP18206 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.19■□□□□ 0.18
VCLP18206 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.19■□□□□ 0.18
VCLP18206 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.19■□□□□ 0.18
VCLP18206 AC027612.4-201ENST00000605371 583 ntBASIC16.19■□□□□ 0.18
VCLP18206 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
VCLP18206 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.19■□□□□ 0.18
VCLP18206 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VCLP18206 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VCLP18206 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VCLP18206 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VCLP18206 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
VCLP18206 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.18■□□□□ 0.18
VCLP18206 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.18■□□□□ 0.18
VCLP18206 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms